Post-doctoral Researcher in Single-cell Genomics

Post-doctoral Researcher in Single-cell Genomics

Carl von Ossietzky University Oldenburg

Oldenburg, Germany

About us

This project aims to advance single-cell genomics to resolve microdiversity and functional roles of microorganisms in complex marine environments. Building on emerging semi-permeable capsule technologies, the project will enable high-throughput, genome-resolved access to individual cells. This will allow the characterization of strain-level diversity and metabolic interdependencies that remain inaccessible through conventional metagenomics. Embedded within the Excellence Cluster Ocean Floor – Earth’s Uncharted Interface, the project will contribute to understanding how microbial processes regulate carbon and elemental fluxes across the pelagic–benthic continuum.

The successful candidate is expected to contribute to innovative research outputs and the development of novel methodologies in single-cell genomics.

Your tasks

• Contribute to the development of a modular pipeline for sequencing single-cell genomes using encapsulation technology
• Generate high-quality genomic data
• Analyze data and lead the preparation of scientific publications
• Contribute to teaching activities at the graduate level

Your profile

Required qualifications:

• Completed academic university degree (Master or Diploma, not from a University of Applied Sciences) in a relevant field;
• PhD in a relevant field;
• Strong motivation to learn, develop, and take ownership of research projects;
• Experience working in an international research environment;
• Proven ability to work both independently and as part of a team;
• Ability to give and receive constructive feedback.

Desired/Advantageous:

• Experience with encapsulation technology;
• Experience with cell sorting;
• Experience in genome and/or metagenome analysis.