Postdoc Position in Quantitative Imaging of Pathogen Infection of Plants

Postdoc Position in Quantitative Imaging of Pathogen Infection of Plants

Utrecht University - Faculty of Science

Utrecht, Netherlands

Job description

Are you enthusiastic for the endeavor to connect biology and physics to enable the development of innovative imaging methods for plant disease phenotyping? If so, you could be the right person to work as a Postdoc on a NWO TTW partnership project entitled “PATHOVIEW: automated imaging of pathogen-infection of crops to understand, track, and quantify disease resistance traits”, which is a collaboration between Utrecht University, the Delft University of Technology (TUD) and the vegetable breeding company Rijk Zwaan. As the selected candidate, you will work under the supervision of Prof Guido Van den Ackerveken at the Plant-Microbe Interactions group external linkat UU and Dr Jeroen Kalkman at the Department of Imaging Physics external linkat TUD.

The PATHOVIEW project aims to provide new technology to improve the selection and breeding of resistant crops. Currently, research on pathogenic microbes and host plant resistance is hampered by the lack of automated imaging and analysis methods. To effectively identify and use plant resistance traits, we aim to develop new imaging solutions of novel biomarkers to quantify pathogen infection and plant resistance. We will work on downy mildew, which is the number one disease of lettuce and is caused by the pathogen Bremia lactucae. New automated imaging tools and methods will strongly enhance our knowledge on downy mildew diseases, resistance mechanisms, and new traits for resistance breeding. The project is a combination of biological and technical research aimed at uniting different expertise and methods to develop a sensitive, unbiased, and automated platform for digital plant disease phenotyping.

As a Postdoc you bring in experience in measuring plant phenotypes, using sensors and imaging methods, acquiring quantitative data, image processing/analysis, and the integration of biological and physical data. Your work will involve the discovery of biomarkers, the implementation of advanced visualization technologies, and multiscale 3D plant imaging. The developed methods will be instrumental in the research on pathogen virulence and plant immunity traits that is envisioned within the project.

Qualifications

We are looking for a committed, driven and collaborative colleague, who:

  • has a PhD in biology/physics and proven experience with image acquisition/processing/analysis and/or plant phenotyping;
  • has a fascination for applying state-of-the-art technology to answer biological questions and feels at ease at the interface of biology and physics;
  • has excellent communication, presentation and writing skills;
  • is a strong team player and shows initiative;
  • has a hands-on mentality.

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EuroJobsites is a registered company number: 4694396 VAT number: GB 880 9055 04

Registered address: EuroJobsites Ltd, Unit 8, Kingsmill Business Park, Kingston Upon Thames, London, KT1 3GZ, United Kingdom

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